Publications
Y.-T. Chen, M. J. Scanlan, C. A. Venditti, R. Chua, Theiler, G., B. J. Stevenson, C. Iseli, A. O. Gure, T. Vasicek, R. L. Strausberg, C. V. Jongeneel, L. J. Old, and A. J. G. Simpson: Identification of cancer/testis-antigen genes by massively parallel signature sequencing. Proc. Natl. Acad. Sci.USA 102:7940-7945, 2005.
Y.-T. Chen, C. Iseli, C. A. Venditti, L. J. Old, A. J. G. Simpson, and C. V. Jongeneel: Identification of a new cancer/testis gene family, CT47, among expressed multi-copy genes on the human X chromosome. Genes Chromosomes & Cancer 45:392-400, 2006.
S. Gnjatic, H. Nishikawa, A. A. Jungbluth, A. O. Gure, G. Ritter, E. Jager, A. Knuth, Y.-T. Chen, L. J. Old: NY-ESO-1: Review of an immunogenic tumor antigen. Adv Cancer Res. 95:1-30, 2006.
T. Scognamiglio, E. Hyjek, J. Kao, and Y.-T. Chen: Diagnostic utility of HBME1, Galectin3, CK19, and CITED1 and evaluation of their expression in encapsulated lesions with questionable features of papillary thyroid carcinoma. Am. J. Clin. Pathol. , 2006.
S. Rohan, J. J. Tu, J. Kao, P. Mukherjee, F. Campagne, X. K. Zhou, E. Hyjek, M. A. Alonso, and Y.-T. Chen: Gene expression profiling separates chromophobe renal cell carcinoma from oncocytoma and identifies vesicular transport and cell junction proteins as differentially expressed genes. Clin. Cancer Res. 12:6837-6945, 2006.
R. K. Yantiss, A. M. Panczykowski, J. Misdraji, R. D. Odze, and Y.-T. Chen: A comprehensive study of non-dysplastic and dysplastic serrated lesions of the vermiform appendix. Am. J. Surg. Pathol. 31:1742-1753, 2007.
J. J. Tu, S. Rohan, J. Kao, N. Kitabayashi, S. Mathew and Y.-T. Chen: Gene Fusions between TMPRSS2 and ETS Family Genes in Prostate Cancer: Frequency and Transcript Variant Analysis by RT-PCR and FISH on Paraffin-Embedded Tissues. Mod. Pathol. 20:921-928, 2007.
Y. B. Chen, J. J. Tu, J. Kao. X. K. Zhou, and Y.-T. Chen: Survivin as a useful adjunct marker for the grading of papillary urothelial carcinoma. Arch. Pathol. Lab. Med. 132:224-231, 2008.
P. L. Wagner, Y.-T. Chen, and R. K. Yantiss: Immunohistochemical and molecular features of sporadic and FAP-associated duodenal adenomas of the ampullary and non-ampullary mucosa. Am. J. Surg. Pathol. 32:1388-1395, 2008.
Y.-T. Chen, N. Kitabayashi, X. K. Zhou, T. J. Fahey III and T. Scognamiglio: MicroRNA analysis as a potential diagnostic tool for papillary thyroid carcinoma. Mod. Pathol. 21: 1139-1146, 2008.
O. Hofmann, O. L. Caballero, B. J. Stevenson, Y.-T. Chen, T. Cohen, R. Chua, C. A. Maher, S. Panji, U. Schaefer, A. Kruger, M. Lehvaslaiho, P. Carninci, Y. Hayashizaki, C. V. Jongeneel, A. J. Simpson, L. J. Old, and W. Hide: Genome-wide analysis of cancer/testis gene expression. Proc. Natl. Acad. Sci. USA 105:20422-20427, 2008.
P. L. Wagner, N. Kitabayashi, Y.-T. Chen, and A. Saqi: Combined small cell lung carcinomas: genotypic and immunophenotypic analysis of the separate morphologic components. Am. J. Clin. Pathol. 131:376-382, 2009.
L. G. Almeida, N. J. Sakabe, A. R. Deoliveira, M. C. Silva, A.S. Mundstein, T. Cohen, Y.-T. Chen, R. Chua, S. Gurung, S. Gnjatic, A. A. Jungbluth, O. L. Caballero, A. Bairoch, E. Kiesler, S. L. White, A. J. Simpson, L. J. Old, A. A. Camargo, and A. T. Vasconcelos: CTdatabase: a knowledge-base of high-throughput and curated data on cancer-testis antigens. Nucleic Acids Res. 37: D816-819, 2009.
